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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs13258584 chr8:71671579 G/A XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs13261712 chr8:71732264 T/C XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs13264669 chr8:71626772 G/A XKR9 chr8:71581600-71702606:+ 0.72 6.83 9.23E-9 Box Plot
ACC rs13269513 chr8:71578079 A/C XKR9 chr8:71581600-71702606:+ 0.65 6.66 1.71E-8 Box Plot
ACC rs13271442 chr8:71585169 T/C XKR9 chr8:71581600-71702606:+ 0.68 6.86 8.24E-9 Box Plot
ACC rs13272523 chr8:71641472 G/A XKR9 chr8:71581600-71702606:+ 0.71 6.74 1.29E-8 Box Plot
ACC rs13274062 chr8:71737087 G/C XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs13274381 chr8:71765094 A/G XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs13358339 chr5:96295810 T/C ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs1337854 chr6:86724015 C/T SNHG5 chr6:86370668-86388454:- 0.61 5.24 2.92E-6 Box Plot
ACC rs13379083 chr14:64391713 T/C SYNE2 chr14:64319701-64693151:+ 1.03 5.3 2.41E-6 Box Plot
ACC rs13397724 chr2:132184976 A/G LOC150776 chr2:132250386-132279149:+ 0.52 6.04 1.65E-7 Box Plot
ACC rs13436566 chr5:112768725 T/A APC chr5:112043195-112181936:+ 0.89 5.21 3.25E-6 Box Plot
ACC rs1348535 chr8:71662741 A/C XKR9 chr8:71581600-71702606:+ 0.79 6.75 1.23E-8 Box Plot
ACC rs1353057 chr8:71922097 C/T XKR9 chr8:71581600-71702606:+ 0.62 5.92 2.57E-7 Box Plot